The Magma Base doesn't exist in Sapphire Version, but the team Aqua's Base is located outside of Lilycove City.
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you can catch one in team magmas hideout
after getting into team magmas hideout
First go to mt pyre get the magma emblem then go up jagged pass on the acro bike. the floor will start to vibrate and the cve will appear
There is a master ball in the Team Magma's hideout in Pokémon Ruby Sapphire, and Emerald. Look in the Hoenn region for the Team Magma's base of operations.
team magmas hideout is where you go down from the cable car, east of lavaridge. aqua is a surf north away from lilycove or mossdeep, i forgot sorry.