Sootopolis City.
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well after you go through the encounter in mossdeep he is still in mossdeep in a house to the north western part of mossdeep
lillycove city then go to mossdeep but beforeyou go to mossdeep deafeat team aqua
Sootopolis city.
Mossdeep city
From lilycove city if you go east you can reach mossdeep city.