the best are:
kyogre- main story pokemon
rayquaza- also sub main story pokemon
and your choice of either latias or latios
regirock
registeel
regice
The Most Powerful Team (6) Pokemon to have while in Pokemon Sapphire would be...
Swellow
Lunatone
Mightyena
Kyogre
Rayquaza
One of the 3 starters in fully evolved form (mostly Swampert)
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the best pokemon to use is mudkip.
there is no best with lots of love and care your electric Pokemon can be the best there is :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :) :)
Best non-legendary water pokemon would be Gyarados. Best legendary water pokemon is Kyogre.
Blaziken or Toarkal.
the best Pokemon to choose early inn the game are Abra and ralts.