To be able to fight the second gym, simply talk to the rocket member guarding the well, then talk to Kurt. Kurt will become angry about the rocket's and go to the well. Go to the well yourself, and defeat the rocket members, and the gym leader's door won't be blocked. Fight the gym leader and gain the badge.
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The second gym is located in Eterna City and uses Grass-type pokemon.
he does not give you a gym badge, but you fight him at the end of Mt. ortar, rock climb is required. hope that helps...
The sixth gym badge is the Marsh Badge and is obtained when you defeat Sabrina at the Saffron City's Second gym. In order to gain access to this gym, you must first remove Team Rocket's presence in Saffron City by defeating Giovanni.
the seventh gym badge snowpoint gym