when you are goin to deliver the Devon goods go to the oceanic museum if there are still team aqua lining up outside go to stern's shipyard and talk to dock near a blueprint of a ship then go back to the museum pay P50 first for the entrance fee and then talk to a team aqua and will give you a tm46 thief and he will run away go upstairs if see a man near the replica of s.s.anne talk to him because his capt. stern!! and two team aqua grunts will battle you! and give the Devon goods
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While in Lilycove City, you can find Captain Stern in that museum place where Team Magma/Aqua are standing by. I forgot how to get rid of them, but once you do, you can find Captain Stern in that museum place I mentioned.
Captain Stern will be in the Oceanic Museum. There will be Team Aqua members outside. They will once clear when you go into the shipyard when you will find a man beside a table. Once you talk to him, the Aqua members will be gone and you can enter the Museum for $50. Hope this helps!
You first meet Capt. Stern upstairs in the museum, where team Aqua/Magma (I forget which) are originally blocking the doorway.
Captain Stern is first located at Slateport City. After saving Mr Briney's Peeko on the tunnel, go to Briney's hut and talk to him. After delivering the goods at Steven and finishing the gym at the Dewford town, talk to Mr. Briney and go to Slateport City. Go up and enter the museum. On the second floor, captain stern was standing next to the scale model of SS Anne.
You talk to Mr. Stone in Rustboro City after delivering the letters to Champion Steven and Captain Stern.