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What to do after you get the master ball in Pokemon emerald?
capture legendary Pokemon like rayquaza.
What do you do in the sky pillar in Pokemon ruby?
Ride the Mach Bike up the pillar when you get to the top you can capture Rayquaza.
How do you catch Rayquaza if you kill it?
You Can. When you knock out a Pokemon, the Pokemon has fainted and cannot be captured Until you re beat the pokemon league. In the case of one time showing Pokemon (legendaries just like Rayquaza), if you knock it out, you can capture it without restarting the game and going all the way back to the point to capture it. I personally always save the game before I ever battle a legendary Pokemon, and if i successfully capture the Pokemon, i save the game right after i get it to avoid an accidental loss of data.
What do you do after when you capture Groudon in Pokemon soul silver?
You can try to get the other kind of orb which will get you kyogre and after you get kyogre you can go back there and get rayquaza.
How do you get Rayquaza on Pokemon Pearl?
You can't get Rayquaza on Pokemon Pearl. You have to MIGRATE it
