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You need the Silph Scope to find the ghost's identity bet you have to get it from Team Rocket's boss. When you defeat him, he will leave it behind. Get it and go to Pokemon Tower. Then go to the stairs where a ghost won't let you pass. You find out the ghost's identity, which is Marowak. Then defeat it and it will calm down and depart to the afterlife.

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Q: Why won't the ghost let you through the stairs in the Pokemon tower on fire red?
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The stairs are blocked by an unidentifiable ghost. To be able to get past this ghost, you have to go to the Silph Co. building in Saffron City and defeat team rocket (this includes Giovanni). Next, go up to the old man on the couch and talk to him. he should give you an item called a Silph Scope. Go back to Pokemon Tower and walk to that set of stairs that is blocked by the ghost. This time when you battle it, the Silph Scope will identify the ghost as a deceased Marowak. Defeat it and you can get to the top.

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You will need PokeFlute, You can get it from Mr. Fuji, after you have saved him from Team Rocket in Pokemon Tower. How to get trought the ghost in Pokemon Tower and save Mr. Fuji? You must get Silph Scope to identify the ghost, you can get it from Silph Co. (The big house in the center of Saffron City) You must defeat Team Rockets inside the house, Their Boss, Giovanni will give you the Silph Scope. Go back to Lavender Town and walk trough the Pokemon Tower, you will encounter a Ghost near the stairs. The Silph Scope will identify it as Marowak, but you can't capture it, you must defeat it.¨ Go up the stairs and defeat Rocket Grunts. Now, just talk to Mr. Fuji ^^ Good Luck^^

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