It-a look-a like this:
http://images1.wikia.nocookie.net/es.pokemon/images/thumb/7/7a/Aqua_Symbol.jpg/180px-Aqua_Symbol.jpg
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If if its a lower level like 10-20 you should probably go to the cave on the mountain where you fight team aqua.
First you need to FLY back to SLATEPORT CITY, and talk to Captain Stern. Then Team Aqua will steal some kind of submarine, and then you can FLY back to Lilycove, and surf to the right in the city and go inside team aqua secret cave and then you have do some shiznit inside of their cave, you know like pokemon stuff, and when your done, the Wailers are Gone, gone I tell you, GOOOOOOOOOOOOOONE..!!!!!
You go to Mossdeep and defeat the Gym leaders there. Then Steven will give you the HM move dive. Then you can go south of Mossdeep to find a trench. You use dive here (with a pokemon that learned it), and go south until you find a cave area . Go in and there should be the submarine. Press B (this reverses dive) and you should come up to where the team took the submarine. Go into the cave located here and you should find Team Aqua. At the end of the cave you will find Aqua Leader Maxie trying to awaken Kyogre. Just like with Groudon, Kyogre just leaves. Then you may go to Sootopolis and see the show.
the Pokemon you like the most. either torchic or mudkip cause treeco messes up your whole team
Water