What to do after you talk to prof oak about groudon
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trade kyogre from heart gold our migrate form Sapphire or emerald. then show prof. oak kyrogre and he will give you the jade orb.
First you need to gave caught the kyogre or groudon in heartgold or soulsilver. Then go to professor oak's lab put the kyogre first or groudon
You need to show Prof. Oak a HG Kyogre and a SS Groudon from the Embedded Tower to get the green orb.
Trade from another game.To find Rayquaza at the Embedded Tower you must show Professor Oak a Groudon and Kyogre caught at the Embedded Tower. The Embedded Tower is new to HeartGold and SoulSilver. In HeartGold you catch Kyogre but cannot catch Groudon and vice-versa in SoulSilver, so you must trade with someone who has SoulSilver for a Groudon then show that to Professor Oak. If the Pokemon is not caught at the Embedded Tower then it won't count.
You show it to Professor Oak. After that, he'll ask you if you can obtain a Kyogre, which is only available on Pokemon Heart Gold. Once you obtain a Kyogre, put both Groudon and Kyogre in your party and show it to Professor Oak. He'll give you the Jade Orb, which enables you to catch Rayquaza.