there are lots of special places in emerald! the battle frontier, artistan cave (smeargle) , sealed chamber, island cave (regice) , desert underpass (ditto and the other fossil you did not collect) , mirage island (wynaut) , desert ruins (regirock) , ancient tomb (registeel) , sky pillar (rayquaza) , marine cave (kyogre) , terra cave (groudon) .
Key: the names in brackets are the Pokemon that can befound there.
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there were some special events at the time emerald was new that you could get them from toys r´us
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Some of them contain items.
Some Pokemon learn this move like marowak and scyther.
There are 386 Pokemon in the game. Some Pokemon aren't available to capture in the game, including some that have to be traded from other games, and event legendary Pokemon.