In order to get your Pokemon to follow you into Pokemmo you have to drag it from the party bar and then go to Pokemmo. Doing this should make your Pokemon follow you into Pokemmo with no problem.
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Pokemon Mansion on cinnabar island
In video games, the only version you can make your Pokemon follow you is in Pokemon yellow ( only pikachu), Pokemon heartgold, and Pokemon soulsilver
low chance in icefall cave
You Can Not But Heart Gold And Soul Silver You Can.....
You cannot make Pokémon follow you in Pokémon Black 2.