No, Flygon cannot learn Dig by leveling up. You will need to use the TM to teach it Dig.
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Flygon doesn't naturally learn either of those moves.
when it gets to lvl 40 or 41, Note that its trapinch who learns dig, not vibrava or flygon.
If you mean Aron, it learns Dig by using the TM28. If you mean, Aggron, it can also learn Dig by using the TM28. They both cannot learn Dig naturally by leveling up.
he can learn dig i don't know what level but he can if you use the TMthis is the best answer: trapinch can't evolve to get dig. On mine it evolved and it did not learned dig but i got another one and i did not evolve it and it learned dig on lv41,and it evolves on lv36 just in case if you want vibrath or flygon. .
With a TM.