After Order 66, the people of Naboo were forced to live (and support) under the Emperor's rule. Despite the fact they had to help build an Imperial establishment, they did so in a way that reminded the people of the old days of peace.
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Order 66 was the codename for the command that all the Clone Troopers should immediately turn on their Jedi commanders and kill them. Palpatine gave the order and told the Clone Commanders it was because the Jedi were exacting their plot to take control of the Republic, but it was actually Palpatine that was taking control.
Order 66 is a direct order to the clone troopers, given by Chancellor Palpatine, to have the Jedi eliminated for acting against the best interests of the Republic. When the order is given, the troopers are genetically programmed to act on it, regardless of their relationship to the Jedi.
Rex retired The 501st over to Commander Appo and there is no record of Rex after that, Rex was long gone before order 66 occurred.
He went to Naboo and other adventures to other plants such as Tatooni, and also underwater in his Gungan Sub
It may not be the right, but Beautiful Young Crew by Lawrence Arabia is very very similar